Yijie Wang and Xiaoning Qian, "Stochastic block coordinate Frank-Wolfe algorithm for large-scale biological network alignment,", EURASIP Journal on Bioinformatics and Systems Biology, 2016: 9, 9 pages, doi: 10.1186/s13637-016-0041-1, 2016.  (Journal Publication)  [More Details]  [Online]

M. Imani and U.M. Braga-Neto, "Control of Gene Regulatory Networks with Noisy Measurements and Uncertain Inputs", IEEE Transactions on Control of Network Systems, Early Access, Vol. PP, Issue 99, 2017, pp. 1-1.  (Journal Publication)  [More Details]  [Online]

A. Karbalayghareh, U.M. Braga-Neto, and E.R. Dougherty, "Classification of Single-cell Gene Expression Trajectories from Incomplete and Noisy Data", IEEE/ACM Transactions on Computational Biology and Bioinformatics,Early Access, Vol. PP, Issue 99, 2018, pp. 1-1.  (Journal Publication)  [More Details]  [Online]

M. Imani and U.M. Braga-Neto, "Point-Based Methodology to Monitor and Control Gene Regulatory Networks via Noisy Measurements", IEEE Transactions on Control Systems Technology, Early Access, Vol. PP, Issue 99, 2018, pp. 1-13.  (Journal Publication)  [More Details]  [Online]

Man Kim, Huan Zhang, Huijuan Yan, Byung-Jun Yoon, and Won-Bo Shim, "Characterizing co-expression networks underpinning maize stalk rot virulence in Fusarium verticillioidesthrough computational subnetwork module analyses", Scientific Reports, accepted.  (Journal Publication)  [More Details]  [Online]

N. Ghaffari, O. A. Arshad, H. Jeong, J. Thiltges, M. F. Criscitiello, B.-J. Yoon, A. Datta and C. D. Johnson, "Examining De Novo Transcriptome Assemblies via a Quality Assessment Pipeline",   (Journal Publication)  [More Details]  [Online]

A. Al Kawam, A. Sen, A. Datta and N. Dickey, "Understanding the Bioinformatics Challenges of Integrating Genomics into Healthcare", IEEE Journal of Biomedical and Health Informatics, DOI: 10.1109/JBHI.2017.2778263, to appear.  (Journal Publication)  [More Details]  [Online]

Navadon Khunlertgit and Byung-Jun Yoon, "Identification of robust pathway markers for cancer through rank-based pathway activity inference", Advances in Bioinformatics, vol. 2013, Article ID 618461, 8 pages, 2013.  (Journal Publication)  [More Details]  [Online]

Sayed Mohammad Ebrahim Sahraeian and Byung-Jun Yoon,, "SMETANA: accurate and scalable algorithm for probabilistic alignment of large-scale biological networks", PLoS One, 8(7): e67995, 2013.  (Journal Publication)  [More Details]  [Online]

Byung-Jun Yoon, "Sequence alignment by passing messages", BMC Genomics, 15(Suppl 1):S14, 2014.  (Journal Publication)  [More Details]  [Online]