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Journal: BMC Genomics

Easton Li Xu, Xiaoning Qian, Qilian Yu, Han Zhang, Shuguang Cui, "Feature selection with interactions in logistic regression models using multivariate synergies for a GWAS application", BMC Genomics, 19(Suppl 4): 170, 9 pages, doi: 10.1186/s12864-018-4552-x, 2018.  (Journal Publication)  [More Details]  [Online]

MeltemApaydin, Liang Xu, Bo Zeng, Xiaoning Qian, "Robust mutant strain design by pessimistic optimization", BMC Genomics, 18(S6): 677, 12 pages, doi: 10.1186/s12864-017-4025-7, 2017  (Journal Publication)  [More Details]  [Online]

J. Abante, N. Ghaffari, C. Johnson and A. Datta, "HiMMe: Using Genetic Patterns as a Proxy for Genome Assembly Reliability Assessment", BMC Genomics, 18:694, 2017.   (Book Chapter)  [More Details]  [Online]

Byung-Jun Yoon, "Sequence alignment by passing messages", BMC Genomics, 15(Suppl 1):S14, 2014.  (Journal Publication)  [More Details]  [Online]

Y. Sun, U.M. Braga-Neto and E.R. Dougherty, "A systematic model of the LC-MS proteomics pipeline", BMC Genomics, GENSIPS'2011 Special Issue, Vol. 13, Suppl. 6, October 2012, p. S2, doi:10.1186/1471-2164-13-S6-S2  (Journal Publication)  [More Details]  [Online]

Sun, Y., Braga-Neto, U. M., and Dougherty, E. R., "Modeling and Systematic Analysis of the LC-MS Proteomics Pipeline", BMC Genomics, 2012, Vol. 13 (supp 6):S2  (Journal Publication)  [More Details]  [Online]

Ryan Doan, Noah D Cohen, Jason Sawyer, Noushin Ghaffari, Charles D Johnson, Scott V Dindot, "Whole-Genome Sequencing and Genetic Variant Analysis of a Quarter Horse Mare", BMC Genomics, 2012; 13 (1): 78  (Journal Publication)  [More Details]  [Online]

Li, X., Qian, L., Hua, J., Bittner, M. L., and Dougherty, E. R., "Assessing the Efficacy of Molecularly Targeted Agents on Cell Line-based Platforms by Using System Identification", BMC Genomics, , 2012, Vol. 13 (supp 6):S11.   (Journal Publication)  [More Details]  [Online]

Hsu, F-H., Serpedin, E., Hsiao, T-H., Bishop, A., E. R. Dougherty, and Chen, Y., "Reducing Confounding and Suppression Effects in TCGA Data: An Integrated Analysis of Chemotherapy Response in Ovarian Cancer", BMC Genomics, , 2012, Vol. 13 (supp 6):S13  (Journal Publication)  [More Details]  [Online]

Hsu FH, Serpedin E, Hsiao TH, Bishop AJ, Dougherty ER, Chen Y., "Reducing confounding and suppression effects in TCGA data: an integrated analysis of chemotherapy response in ovarian cancer", BMC Genomics. 2012;13 Suppl 6:S13.   (Journal Publication)  [More Details]  [Online]